Welcome to CWL-Airflow’s documentation!

Python package to extend Apache-Airflow 1.9.0 functionality with CWL v1.0 support.

Cite as

Kotliar M; Kartashov AV; Barski A (2019): Supporting data for “CWL-Airflow: a lightweight pipeline manager supporting Common Workflow Language” GigaScience Database. http://dx.doi.org/10.5524/100618

Contents:

• Run demo
  • Locally
  • VirtualBox
• How It Works
  • Key concepts
  • What’s inside
• Installation
  • Requirements
  • Install cwl-airflow
• Using cwl-airflow
  • Configuration
  • Submitting new job
  • Demo mode
  • Running sample ChIP-Seq-SE workflow
• Troubleshooting